BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C02LP1|AL426172
(797 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1664 1569 0.0
>3x_Contig1664
Length = 15696
Score = 1569 bits (789), Expect = 0.0
Identities = 793/797 (99%)
Strand = Plus / Minus
Query: 1 ttatcttattgaaggtaggaatagtacagcctctctttatataagtatttcgagagattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8899 ttatcttattgaaggtaggaatagtacagcctctctttatataagtatttcgagagattt 8840
Query: 61 atgctgaacgcttacatattatcatactgagttgcacttactacatccacatacatattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8839 atgctgaacgcttacatattatcatactgagttgcacttactacatccacatacatattt 8780
Query: 121 ctttacctttattgactttcctttttttttttccctcttgggctttagtaaaagagtcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8779 ctttacctttattgactttcctttttttttttccctcttgggctttagtaaaagagtcga 8720
Query: 181 gtacagcagtwatctctcaacgaccgaragcgacagaaaaaaggcaagtcgaaatctccc 240
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 8719 gtacagcagtaatctctcaacgaccgaaagcgacagaaaaaaggcaagtcgaaatctccc 8660
Query: 241 tactaaactgtgcgaattaccttgatttaaccgcattaacagacccacaaaatttacgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8659 tactaaactgtgcgaattaccttgatttaaccgcattaacagacccacaaaatttacgtt 8600
Query: 301 agttgtgtcgcagctagctgggcacttaaccgttttgctttgttacatgtactgtatggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8599 agttgtgtcgcagctagctgggcacttaaccgttttgctttgttacatgtactgtatggt 8540
Query: 361 gatgcattacactcgttgacattgtgttgattagttagcttcagctggcttagttattga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8539 gatgcattacactcgttgacattgtgttgattagttagcttcagctggcttagttattga 8480
Query: 421 gattcgtagttatacatttagataaaagatagacggatgtaaagaaaataaagacatgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8479 gattcgtagttatacatttagataaaagatagacggatgtaaagaaaataaagacatgtc 8420
Query: 481 tggagatcttgtgaaatacagatgaagttcacgaagactatactatatttatcatcttac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8419 tggagatcttgtgaaatacagatgaagttcacgaagactatactatatttatcatcttac 8360
Query: 541 tcatttcttaacgtaagargcctttcttcttagcaggaattggagagcttgttggttggt 600
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 8359 tcatttcttaacgtaagaagcctttcttcttagcaggaattggagagcttgttggttggt 8300
Query: 601 tagcaagggaaagttcaagttgacgcttcttttcttctaacgcttttagttggcttgtra 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8299 tagcaagggaaagttcaagttgacgcttcttttcttctaacgcttttagttggcttgtaa 8240
Query: 661 gcttatccttcaattccttgtgtctagcgaacaattcagcttcagatttctgtaacttct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8239 gcttatccttcaattccttgtgtctagcgaacaattcagcttcagatttctgtaacttct 8180
Query: 721 tttccttttcttcaactttctgttggaatactgccttcatttcagcttccaatttagcta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8179 tttccttttcttcaactttctgttggaatactgccttcatttcagcttccaatttagcta 8120
Query: 781 gtttgacttcgtgtagt 797
|||||||||||||||||
Sbjct: 8119 gtttgacttcgtgtagt 8103
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,506
Number of Sequences: 1807
Number of extensions: 11506
Number of successful extensions: 100
Number of sequences better than 1.0e-20: 1
length of query: 797
length of database: 10,358,551
effective HSP length: 16
effective length of query: 781
effective length of database: 10,329,639
effective search space: 8067448059
effective search space used: 8067448059
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)